Software and data currently hosted by DISC Partners

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This is a (live?) list of software and data that is currently hosted by DISC partners. At some point this will probably be turned into a table...

NAME

  • Software/Data: NAME
  • Short description: DESCRIPTION
  • Field: SubFIELD & DISC COLOR
  • Hosted by: WHO
  • Resources: ### CORES, ### GB Memory, ### Disc (HPC NEEDS?)
  • Access: WHO CAN DO WHAT
  • Funding position: WHO PAYS UNTIL WHEN, is renewal needed?
  • SLA: WHAT ARE NEEDS?

DVD

  • Software: Diagnostic Variant Database
  • Short description: A database of variants observed in the human genome in different experiments
  • Field: Next Generation Sequencing, Health
  • Hosted by: UMCG
  • Resources:
  • Access: Database searches only by project partners.
  • Funding position: Volunteered by UMCG. Should be made explicit.
  • SLA: WHAT ARE NEEDS?

GoNL

  • Data: GoNL
  • Short description: 750 fully sequenced human genomes from 250 triplets of father/mother/child.
  • Field: Next Generation Sequencing and Biobanking, Health
  • Hosted by: UMCG
  • Resources: 400 TB Disc Space
  • Access: Project partners can have access.
  • Funding position: Volunteered by UMCG. Should be made explicit.
  • SLA: WHAT ARE NEEDS?

NMC DSP

  • Software: NMC Data Support Platform
  • Short description: Workflow system developed for metabolomics studies
  • Field: Metabolomics & any application
  • Hosted by: NBIC
  • Resources: ### CORES, ### GB Memory, ### Disc (HPC NEEDS?)
  • Access: Public service.
  • Funding position: NBIC pays untill end 2013. Discussion in NMC is going for the future.

NBIC Trac

  • Software/Data: NAME
  • Short description: DESCRIPTION
  • Field: SubFIELD & DISC COLOR
  • Hosted by: WHO
  • Resources: ### CORES, ### GB Memory, ### Disc (HPC NEEDS?)
  • Access: WHO CAN DO WHAT
  • Funding position: NBIC has pre-paid for 5 years, is renewal needed?
  • SLA: WHAT ARE NEEDS?

NBIC Wiki "BioAssist"

  • Software/Data: NAME
  • Short description: DESCRIPTION
  • Field: SubFIELD & DISC COLOR
  • Hosted by: SARA
  • Resources: ### CORES, ### GB Memory, ### Disc (HPC NEEDS?)
  • Access: WHO CAN DO WHAT
  • Funding position: SARA pays.
  • SLA: WHAT ARE NEEDS?

Open PHACTS Wiki

  • Software/Data: NAME
  • Short description: DESCRIPTION
  • Field: SubFIELD & DISC COLOR
  • Hosted by: Procolix
  • Resources: ### CORES, ### GB Memory, ### Disc (HPC NEEDS?)
  • Access: WHO CAN DO WHAT
  • Funding position: NBIC has pre-paid for 5 years, is renewal needed?
  • SLA: WHAT ARE NEEDS?

SurfConext IDP

  • Software/Data: NAME
  • Short description: DESCRIPTION
  • Field: All & All
  • Hosted by: NBIC
  • Resources: ### CORES, ### GB Memory, ### Disc (HPC NEEDS?)
  • Access: WHO CAN DO WHAT
  • Funding position: NBIC pays as we go. Future is under discussion.
  • SLA: WHAT ARE NEEDS?

BET Jenkins

  • Software/Data: NAME
  • Short description: DESCRIPTION
  • Field: All & All
  • Hosted by: NBIC
  • Resources: ### CORES, ### GB Memory, ### Disc (HPC NEEDS?)
  • Access: Engineering Team and close collaborators can use this.
  • Funding position: NBIC pays as we go.
  • SLA: WHAT ARE NEEDS?

NBIC Galaxy

  • Software/Data: NAME
  • Short description: DESCRIPTION
  • Field: SubFIELD & DISC COLOR
  • Hosted by: WHO
  • Resources: ### CORES, ### GB Memory, ### Disc (HPC NEEDS?)
  • Access: WHO CAN DO WHAT
  • Funding position: WHO PAYS UNTIL WHEN, is renewal needed?
  • SLA: WHAT ARE NEEDS?