Focus meeting: Best practice using GRCh38

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Time & Location

Time: Tuesday, March 31, 13.00-15.30

Location: SURF (new location), Kantoren Hoog Overborch (Hoog Catharijne), Moreelsepark 48, 3511 EP Utrecht

For detailed route description: https://www.surf.nl/over-surf/contact/routebeschrijving-surf-surfmarket-en-surfnet/index.html

Agenda

Agenda
Time slot Speaker Subject
12:45-13:00
Coffee/tea
Coffee/tea
13:00-13:20 Ies Nijman (UMCU) Welcome & Introduction to GRCh38 (hg20) ( slides )
13:20-13:40 Pieter Neerinx (UMCG) Migration of tools, pipelines to support GRCh38 ( slides )
13:40-14:00 Pjotr Prins GRCh38 and bwa ( slides )
14:00-14:10
Tea break
Tea break
14:10-14:30 Zuotian Tatum (LUMC) New insights on Differential Gene Expression using GRCh38 ( slides )
14:30-14:50 Wibowo Arindrarto (LUMC) Comparison of hg19 and GRCh38 in the study of DUX4 gene ( slides )
14:50-15:30 Ies Nijman (UMCU) Wrap-up and open discussions

Participants

  • Ies Nijman (UMCU)
  • Wibowo Arindrarto (LUMC)
  • Pieter Neerincx (UMCG)
  • Wai Yi Leung (LUMC)
  • Bart de Koning (MUMC)
  • Saskia Hiltemann (ErasmusMC)
  • Maarten Kooyman (SURFsara)
  • Youri Hoogstrate (ErasmusMC)
  • Jochem
  • Zuotian Tatum (LUMC)
  • Sander Bervoets (ServiceXS)
  • Daniel Borràs (ServiceXS)
  • Stef van Lieshout (VUMC)
  • Martijn Vermaat (LUMC)
  • Peter van 't Hof (LUMC)
  • Robert Ernst (UMCU)
  • Rianne Jansen (The Hyve)
  • Peter Kok (The Hyve)
  • Stephan Nouwens (ErasmusMC)
  • Alexander Schoenhuth (CWI)
  • Robert Kraaij (ErasmusMC)
  • Johan den Dunnen (LUMC)
  • Job van Riet (ErasmusMC)
  • Bert Eussen (ErasmusMC)
  • Tom Brands (ErasmusMC)
  • Pjotr Prins
  • Walter de Valk (ErasmusMC)
  • Thomas Chin-A-Woeng (ServiceXS)
  • Jeroen Laros (LUMC)
  • Rutger Brouwer (ErasmusMC)
  • Harmen van de Werken (ErasmusMC)
  • Theo de Vet (ErasmusMC)
  • Sander Bollen (LUMC)
  • Lars Eijssen (Maastricht University)
  • Tim Dorscheidt (The Hyve)