Focus meeting: Best practice using GRCh38

Time & Location

Time: Tuesday, March 31, 13.00-15.30

Location: SURF (new location), Kantoren Hoog Overborch (Hoog Catharijne), Moreelsepark 48, 3511 EP Utrecht

For detailed route description: https://www.surf.nl/over-surf/contact/routebeschrijving-surf-surfmarket-en-surfnet/index.html

Agenda

Agenda

Time slot	Speaker	Subject
12:45-13:00	Coffee/tea	Coffee/tea
13:00-13:20	Ies Nijman (UMCU)	Welcome & Introduction to GRCh38 (hg20) ( slides )
13:20-13:40	Pieter Neerinx (UMCG)	Migration of tools, pipelines to support GRCh38 ( slides )
13:40-14:00	Pjotr Prins	GRCh38 and bwa ( slides )
14:00-14:10	Tea break	Tea break
14:10-14:30	Zuotian Tatum (LUMC)	New insights on Differential Gene Expression using GRCh38 ( slides )
14:30-14:50	Wibowo Arindrarto (LUMC)	Comparison of hg19 and GRCh38 in the study of DUX4 gene ( slides )
14:50-15:30	Ies Nijman (UMCU)	Wrap-up and open discussions

Participants

• Ies Nijman (UMCU)
• Wibowo Arindrarto (LUMC)
• Pieter Neerincx (UMCG)
• Wai Yi Leung (LUMC)
• Bart de Koning (MUMC)
• Saskia Hiltemann (ErasmusMC)
• Maarten Kooyman (SURFsara)
• Youri Hoogstrate (ErasmusMC)
• Jochem
• Zuotian Tatum (LUMC)
• Sander Bervoets (ServiceXS)
• Daniel Borràs (ServiceXS)
• Stef van Lieshout (VUMC)
• Martijn Vermaat (LUMC)
• Peter van 't Hof (LUMC)
• Robert Ernst (UMCU)
• Rianne Jansen (The Hyve)
• Peter Kok (The Hyve)
• Stephan Nouwens (ErasmusMC)
• Alexander Schoenhuth (CWI)
• Robert Kraaij (ErasmusMC)
• Johan den Dunnen (LUMC)
• Job van Riet (ErasmusMC)
• Bert Eussen (ErasmusMC)
• Tom Brands (ErasmusMC)
• Pjotr Prins
• Walter de Valk (ErasmusMC)
• Thomas Chin-A-Woeng (ServiceXS)
• Jeroen Laros (LUMC)
• Rutger Brouwer (ErasmusMC)
• Harmen van de Werken (ErasmusMC)
• Theo de Vet (ErasmusMC)
• Sander Bollen (LUMC)
• Lars Eijssen (Maastricht University)
• Tim Dorscheidt (The Hyve)